(Friend who chipped the hole he drilled hanging head in shame)
Well, the silicone's permanent as in it's not quick and easy to remove the bulkhead, but it's not permanent as in after the nuclear war there will be cockroaches driving Dodge Darts and your bulkhead will still be in place.
It can be removed, it's just a little more work, as in scraping with a razor blade type work...
If you do have to go the silicone route, not sure if this is the best way to do it, but this is what I did and it worked for me.
Put the bulkhead in, and get the lock-ring in place, but back it off quite a bit. Put a beat of silicone around the bulkhead from the exterior side, working the silicone up into the gap between the bulkhead and the glass.
While the silicone's still wet (I.E. Immediately) screw the lock-ring down holding the whole mess in place.
Of course, if you CAN get away without using silicone, by all means do so, siliconing a bulkhead is not the optimal solution, but it is perfectly workable...