Are you using a baseline ?
Hydrometer's are not really accurate, and most don't have the means to autocorrect for temperature.
IIRC, hydrometers are based on an accuracy rating of xxx/00ppm @ 76 deg.
Thus, if your temp is off, you will have off readings. Most GOOD refractometers do ATC (auto temp correction) whereby they'll adjust up or down depending on water temps.
The first thing I did when I got my refractometer is went to Neptunes and had bill check my Refractometer against his, with a sample of my water.
Turns out mine was .001 or so off.
Since I get alot of my livestock and rock there, and I use salinity equalization as one of my acclimation steps, I wanted it to be as close as possible.
Also, you can order Saline samples from the mail order house to calibrate your refractometer to a known.
BD